PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON55987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 28019.9 Da PI: 5.4816 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.6 | 1.1e-13 | 55 | 97 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++P+ + K++Ka+i + A++YI++L PON55987.1 55 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIDYIQQL 97 57*********************66......*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MENIGEEYKH YWETNMFLQT EELDSWGLED AAFSGYYDSS SPDGAASSAA SKNIVSERNR 60 RKKLNERLFA LRAVVPNISK MDKASIIKDA IDYIQQLHEQ EKSIQAEIIE LESNKVIKKN 120 PGYDFDHELP ILLRSKKKKI DQQFYDSGGS RSGSTSPIEV LELRVTYMGG KTLVVSLTCS 180 KRTDTMVKLC EVFESLKLKI ITANITAFSG RLLKTVFIEA DEEEKDHLKI KIETAIAALN 240 DPQSPMSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-90 | bHLH family protein |