PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55933.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 387aa MW: 42877.1 Da PI: 5.8577

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.3e-12	230	277	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE++RRdr+N++f eL ++l + + +K +Ka+iL Av+ +++L PON55933.1 230 TKACREKQRRDRLNDKFVELGSILEPG---RPPKTDKAAILIDAVRMVNQL 277 6789********************8...89*************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MGGHEQLEKS RVIKVDSEES WGFLITQATN QDSPVVVHFT ASWCMPSVAM NPFFEELALS 60 YQDILFLLVD VDEVKVVASK MEIKAMPTFL LMKEGAIVDK LVGANPEEMR KRINDFSQTK 120 LVEMPKPINL PLFGSRNNPI PGLEYPNSHS IMVSPENTNW LFDYGLIDDI PVPDGNFPVS 180 SSGFSWPVQT LNGSSSVSVE IDGSLGDTEG LKESGSKKRV RSESRNASST KACREKQRRD 240 RLNDKFVELG SILEPGRPPK TDKAAILIDA VRMVNQLRGE AQKLKDSNLS LQEKIKELKV 300 EKNELRDEKQ RLKAEKEKLE QQLKGMNAQP GFLPPPPAIP AAFAAQGQAP GNKLVPFIGY 360 PGVAMWQFMP PAAVDTSQDH VLRPPVA

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MGGHEQLEKS RVIKVDSEES WGFLITQATN QDSPVVVHFT ASWCMPSVAM NPFFEELALS  60
YQDILFLLVD VDEVKVVASK MEIKAMPTFL LMKEGAIVDK LVGANPEEMR KRINDFSQTK  120
LVEMPKPINL PLFGSRNNPI PGLEYPNSHS IMVSPENTNW LFDYGLIDDI PVPDGNFPVS  180
SSGFSWPVQT LNGSSSVSVE IDGSLGDTEG LKESGSKKRV RSESRNASST KACREKQRRD  240
RLNDKFVELG SILEPGRPPK TDKAAILIDA VRMVNQLRGE AQKLKDSNLS LQEKIKELKV  300
EKNELRDEKQ RLKAEKEKLE QQLKGMNAQP GFLPPPPAIP AAFAAQGQAP GNKLVPFIGY  360
PGVAMWQFMP PAAVDTSQDH VLRPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	8e-90	bHLH family protein