PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON55561.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 320aa    MW: 36280.4 Da    PI: 4.644
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON55561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.8e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
       PON55561.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding537.6e-1771111547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +  E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
       PON55561.1  71 SDHEEQMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      789***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDHEEQMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG  120
VDPLTHKPLS TFTXRQLNQD DQLAQHTGTA SSEVIDQRKE NTAEATSFQS YSVTEPKDEL  180
AENSPTSALI VVDEDGMELI NSGLSTDEVP LMEPQEMMMS VVSSFPLSLD QTTSSSNSNP  240
SDFMEDLQLI DPDFEYWPQS DYGSSGMGLW GDDDYFNGWD SLMDHVDRDR KQAVDPPLSQ  300
CPKTVLDQEY WPFGVDFCEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.13e-94MYB family protein