PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55500.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

G2-like

Protein Properties

Length: 448aa MW: 50041.5 Da PI: 6.1315

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	225	279	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rW++eLHe+Fveav++LGGse+AtPk il+lmkv+ Lt++hvkSHLQkYR+ PON55500.1 225 KPRMRWSQELHEAFVEAVNKLGGSERATPKGILNLMKVPVLTIYHVKSHLQKYRT 279 79****************************************************8 PP
2	Myb_DNA-binding	49.5	9.8e-16	227	278	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW++e++e +v+av++lGg t+k I + m +t +++ks++qky+ PON55500.1 227 RMRWSQELHEAFVEAVNKLGGSeraTPKGILNLMKvPVLTIYHVKSHLQKYR 278 89****************99**********889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSLSFPVGST PIEDKYSKLP DTFQVSSRRK MMINSSTRQA SPLSSSAGSG GHLFSPSSRF 60 PSDVPISSVS PHERRSLNSP VISQSSGGMP PIHSSLSEVQ ATEFIGHIEE NKDISWCPDS 120 IQDILDFSGI VQNYQVESST VVVTSETHNE KADWPDWPMI SIGEDLDQFW PDLPVNDNTT 180 DSKPEVLKQS VDTLVQQIQH YQHRSLQSGE QLTIPDPLST ASSTKPRMRW SQELHEAFVE 240 AVNKLGGSER ATPKGILNLM KVPVLTIYHV KSHLQKYRTA RYKPESSEGL SEKKSSPAED 300 VRSKELNTSI GITEALRLQV ELQKRLHEQL ENQRKLQLQI EEQGKYLEKM FDQHKKMENK 360 FKASSSNSND TSDRLSNMHQ PSENDKSEIS EQAPSSKGIG SSKANSVPEK SFIDPSEKQE 420 AHETKTYKEH EPGEGESDVP TTKRARSG

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSLSFPVGST PIEDKYSKLP DTFQVSSRRK MMINSSTRQA SPLSSSAGSG GHLFSPSSRF  60
PSDVPISSVS PHERRSLNSP VISQSSGGMP PIHSSLSEVQ ATEFIGHIEE NKDISWCPDS  120
IQDILDFSGI VQNYQVESST VVVTSETHNE KADWPDWPMI SIGEDLDQFW PDLPVNDNTT  180
DSKPEVLKQS VDTLVQQIQH YQHRSLQSGE QLTIPDPLST ASSTKPRMRW SQELHEAFVE  240
AVNKLGGSER ATPKGILNLM KVPVLTIYHV KSHLQKYRTA RYKPESSEGL SEKKSSPAED  300
VRSKELNTSI GITEALRLQV ELQKRLHEQL ENQRKLQLQI EEQGKYLEKM FDQHKKMENK  360
FKASSSNSND TSDRLSNMHQ PSENDKSEIS EQAPSSKGIG SSKANSVPEK SFIDPSEKQE  420
AHETKTYKEH EPGEGESDVP TTKRARSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	6e-65	G2-like family protein