PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55477.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 993aa MW: 111792 Da PI: 5.0349

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l PON55477.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l PON55477.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFYDVADED RAVDQPKFPT 240 TIEELEGKRR IDVEAQLRKQ DIAKNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP 300 QISDRELEDI AKLGYASDLA GSEGLTEGSA AARALLANYD QTPRRGNTPF RTPQRTPVGK 360 GDAIMMEAEN LARLSQSQTP LLGGENPELH PSDFSGVTPK KNEIQTPNAM LTPSATPGGA 420 GLTPRIGITP SRDGYSFGMT PRGTPIRDEL RINEDMDMHD STRLELRRQA ELKGNVRSGF 480 SNLAPPQNEY QVLMQQPVPE DDDVPEKITE EDMSDRIARE KAEEEARQQA LLKKRSKVLQ 540 RELPRPPAAS LELIRNSLMR ADGDKSSFVP PTLIEQADEM IRKELLTLLE HDNAKYPLNE 600 KVNKEKKKGA RRSANGSAVS IPEIEEFEEV ELKEADDFIK EEAEFLRVAM GHENESLDEF 660 VDAHKTCLND LMYFPTRNAF GLSSVAGNME KLAALQNEFE NVRKNVEDDI KKAANLEKKA 720 KILTDGYELR AKKSLWPQIE ETFKQMDTAA KELECFQALQ KQEQLAASHR INNIWEEVKK 780 QKELEQTLQK RYGDLLAELE RTRHQMDEYR VQAQRQEEIA ANKPELELAE SAANLSAAQS 840 TDDSERIPTL DELGSSMPID PSHDETADQQ TDSIPEHAQS PSSEDQIPPA ADGKLSTLVQ 900 GNSYEAPDGQ LHRPDGLGDG PSEVVAGKNE MAHKSVDEVA NDDVTTIEIA KEFHDVKNQP 960 NLTEQESSIQ ETAVNDGFID GGAKKVSGRG EEM

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFYDVADED RAVDQPKFPT  240
TIEELEGKRR IDVEAQLRKQ DIAKNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP  300
QISDRELEDI AKLGYASDLA GSEGLTEGSA AARALLANYD QTPRRGNTPF RTPQRTPVGK  360
GDAIMMEAEN LARLSQSQTP LLGGENPELH PSDFSGVTPK KNEIQTPNAM LTPSATPGGA  420
GLTPRIGITP SRDGYSFGMT PRGTPIRDEL RINEDMDMHD STRLELRRQA ELKGNVRSGF  480
SNLAPPQNEY QVLMQQPVPE DDDVPEKITE EDMSDRIARE KAEEEARQQA LLKKRSKVLQ  540
RELPRPPAAS LELIRNSLMR ADGDKSSFVP PTLIEQADEM IRKELLTLLE HDNAKYPLNE  600
KVNKEKKKGA RRSANGSAVS IPEIEEFEEV ELKEADDFIK EEAEFLRVAM GHENESLDEF  660
VDAHKTCLND LMYFPTRNAF GLSSVAGNME KLAALQNEFE NVRKNVEDDI KKAANLEKKA  720
KILTDGYELR AKKSLWPQIE ETFKQMDTAA KELECFQALQ KQEQLAASHR INNIWEEVKK  780
QKELEQTLQK RYGDLLAELE RTRHQMDEYR VQAQRQEEIA ANKPELELAE SAANLSAAQS  840
TDDSERIPTL DELGSSMPID PSHDETADQQ TDSIPEHAQS PSSEDQIPPA ADGKLSTLVQ  900
GNSYEAPDGQ LHRPDGLGDG PSEVVAGKNE MAHKSVDEVA NDDVTTIEIA KEFHDVKNQP  960
NLTEQESSIQ ETAVNDGFID GGAKKVSGRG EEM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein