PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55178.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 749aa MW: 80876.6 Da PI: 6.1837

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.4	1.2e-32	266	322	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g Hnh PON55178.1 266 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-DGQITEIIYKGAHNHA 322 7**************************************.*************7 PP
2	WRKY	101.7	4.2e-32	483	541	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe PON55178.1 483 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKCVITTYEGKHNHE 541 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MGEGEPKGVI APSSSDDRKT LIPASEKEED EEGMGLMAAV KGGGTSIAER RAAKFGFNAV 60 KINTARFRTT SPLASPAARS PCLTIPPGIS PTALLDSPIM LPNSQALPSP TTGTFPLPSF 120 HHESSILNSA TREGGDNGGG AESFRFKPYG DFRSLPGFST FGNQQTDTQG QAIVLEQSSM 180 DFEFPAEFPG EATTKYCVDS SNGVKILNSM MIDAKCVDKK MSPDVTSDQT SLSRKSVHGE 240 CNATNDLSEG NQSGSYPSAG MVRTSEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCQVKK 300 KVERSHDGQI TEIIYKGAHN HAKPQPNRRA TPGSAFSFDE MSEVSEGSGT CLKVEGGSAW 360 TNIQSGSTDI KLGSDGRTDG MEITSSTSVV TELSDPLSTI HGKSIGTIES ADTPELSSTV 420 ASHEDDEDGA TQGSISLGGD ADDEDSEAKR RKKESCLIET NLTSRAVREP RVVVQIESEV 480 DILDDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCSVRKHV ERASHNLKCV ITTYEGKHNH 540 EVPAARNGNH MNSSGANVPP AANNAQPALT LPRNTNIPKP ETHIQDFAPH FDRKPEFNEY 600 LRPSFAGNFS NDVRFGASSF YQMKFPPLQH PIPYTSFGLN PNRIATQQGA SVASFVPDFP 660 MSLPMNLAPS GSLVGFDFNS GKSVAPVPPL LSGQQLQEND TRFLRPKQEQ NDEIVYDACL 720 PLADNANAPS LSSLSSSSVY NRIMGSFPS

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MGEGEPKGVI APSSSDDRKT LIPASEKEED EEGMGLMAAV KGGGTSIAER RAAKFGFNAV  60
KINTARFRTT SPLASPAARS PCLTIPPGIS PTALLDSPIM LPNSQALPSP TTGTFPLPSF  120
HHESSILNSA TREGGDNGGG AESFRFKPYG DFRSLPGFST FGNQQTDTQG QAIVLEQSSM  180
DFEFPAEFPG EATTKYCVDS SNGVKILNSM MIDAKCVDKK MSPDVTSDQT SLSRKSVHGE  240
CNATNDLSEG NQSGSYPSAG MVRTSEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCQVKK  300
KVERSHDGQI TEIIYKGAHN HAKPQPNRRA TPGSAFSFDE MSEVSEGSGT CLKVEGGSAW  360
TNIQSGSTDI KLGSDGRTDG MEITSSTSVV TELSDPLSTI HGKSIGTIES ADTPELSSTV  420
ASHEDDEDGA TQGSISLGGD ADDEDSEAKR RKKESCLIET NLTSRAVREP RVVVQIESEV  480
DILDDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCSVRKHV ERASHNLKCV ITTYEGKHNH  540
EVPAARNGNH MNSSGANVPP AANNAQPALT LPRNTNIPKP ETHIQDFAPH FDRKPEFNEY  600
LRPSFAGNFS NDVRFGASSF YQMKFPPLQH PIPYTSFGLN PNRIATQQGA SVASFVPDFP  660
MSLPMNLAPS GSLVGFDFNS GKSVAPVPPL LSGQQLQEND TRFLRPKQEQ NDEIVYDACL  720
PLADNANAPS LSSLSSSSVY NRIMGSFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-114	WRKY family protein