PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54568.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 468aa MW: 47979.3 Da PI: 6.3485

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	270	315	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq PON54568.1 270 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 315 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MQPCSREMQG NNINSLISFQ DLQNQSSSSS ASIQASAAHH FEQGPAHDDF LEQMLSTLGQ 60 QQPSWADLGP PGGGGGGGAA AANAKAPWET LKPRDLSDET APSGHENVAF PYNESVNLAS 120 KFRNHQISGG GGSKSAAAAA AAMMLQQQLM MARGLAGAGG SGGAGLMPMP LSISNGDFDR 180 SQNDVVDGSS FKSPNPGGDG SVQALLNGFA GSLPGSGQAP NQFHHPQASN FGPSGAAMNQ 240 TPGPSGSAGA AAAQPRPRIR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK 300 ASMLDEIIDY VKFLQLQVKV LSMSRLGGAA AVAPLVADMS SEGGGDCIQA NTTGGALGRT 360 SNGNQTASSN DTMTVTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHTRN 420 PLINNPAMAS NGEGPSSPSM SVLTVQSATM GNGNVDGSVK DAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MQPCSREMQG NNINSLISFQ DLQNQSSSSS ASIQASAAHH FEQGPAHDDF LEQMLSTLGQ  60
QQPSWADLGP PGGGGGGGAA AANAKAPWET LKPRDLSDET APSGHENVAF PYNESVNLAS  120
KFRNHQISGG GGSKSAAAAA AAMMLQQQLM MARGLAGAGG SGGAGLMPMP LSISNGDFDR  180
SQNDVVDGSS FKSPNPGGDG SVQALLNGFA GSLPGSGQAP NQFHHPQASN FGPSGAAMNQ  240
TPGPSGSAGA AAAQPRPRIR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK  300
ASMLDEIIDY VKFLQLQVKV LSMSRLGGAA AVAPLVADMS SEGGGDCIQA NTTGGALGRT  360
SNGNQTASSN DTMTVTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHTRN  420
PLINNPAMAS NGEGPSSPSM SVLTVQSATM GNGNVDGSVK DAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	280	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-66	bHLH family protein