PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54436.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HSF

Protein Properties

Length: 355aa MW: 41037 Da PI: 4.9653

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.6	5.5e-35	44	134	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws++g+sfvv+d+++fa ++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ + +g+k+ll++ik PON54436.1 44 FLTKTYDMVDDPATNRILSWSRDGTSFVVWDPHSFAMNLLPRYFKHNNFSSFVRQLNTYGFRKIDADR---------WEFANEGLIRGQKHLLRNIK 131 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r++ PON54436.1 132 RRR 134 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNFLYPVKEE YPSGSSSSQD AGGDSRMPPP QPMEGLHDVG PPPFLTKTYD MVDDPATNRI 60 LSWSRDGTSF VVWDPHSFAM NLLPRYFKHN NFSSFVRQLN TYGFRKIDAD RWEFANEGLI 120 RGQKHLLRNI KRRRAPPQPF LQEQQALGPC VELGRFGLDG EIDRLRRDKQ VLMMELVKLR 180 QQQQNTRAYL RAMEQRLQGT EMKQQHMMAF LARAMQNPSF LQQLVRQKER RKSLQEAMTK 240 KRRRPIDQGP SSSSRSSEPE MSQNPIKMEP LEVSDYGFEV SELEALALEM QGFGKQRMEQ 300 EDGEDDELEA QESEDRELDD GFWEELFSEG AKGGEDEEDV NVLADRFGYL GSSPR

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNFLYPVKEE YPSGSSSSQD AGGDSRMPPP QPMEGLHDVG PPPFLTKTYD MVDDPATNRI  60
LSWSRDGTSF VVWDPHSFAM NLLPRYFKHN NFSSFVRQLN TYGFRKIDAD RWEFANEGLI  120
RGQKHLLRNI KRRRAPPQPF LQEQQALGPC VELGRFGLDG EIDRLRRDKQ VLMMELVKLR  180
QQQQNTRAYL RAMEQRLQGT EMKQQHMMAF LARAMQNPSF LQQLVRQKER RKSLQEAMTK  240
KRRRPIDQGP SSSSRSSEPE MSQNPIKMEP LEVSDYGFEV SELEALALEM QGFGKQRMEQ  300
EDGEDDELEA QESEDRELDD GFWEELFSEG AKGGEDEEDV NVLADRFGYL GSSPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	244	RRKSLQEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-123	HSF family protein