PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54130.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 430aa MW: 47496.6 Da PI: 7.1023

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	125	170	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ PON54130.1 125 RGHWRPAEDAKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 170 899***************************.*********996 PP
2	Myb_DNA-binding	56.9	4.6e-18	177	220	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ PON54130.1 177 RRAFTEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 220 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MAKNCVIYNT EENQNSSRSS SSPLSCYSSS YSQYCSSMGM VYADMGSLSL SPNLGVVSSP 60 ESYNISKCSE VENRRALWGF PLMEGGSKGS DSSEKANLDD ENLNENVMIS TGKETDSGQS 120 KLCARGHWRP AEDAKLKELV ALYGPQNWNL IAEKLEGRSG KSCRLRWFNQ LDPRINRRAF 180 TEEEEERLMQ AHRIYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS SAYRRRKLSQ 240 SIYRRMEENS SFVVCGEAIQ RADPPLTYCL NNLPSGGLGN VSTYPYGAFN GGNSNDGSGI 300 PYGLNFPPQI SSCGEAIISS SKVQSANTGF CVQETPYEFF PGANNRGWEY MRSNIDEAQT 360 QSGGVVLHQN ANLYQNFHQS FSNSTVSTSQ ASAGDRPSSS GAAEQNATSH FDKIGTNPPP 420 FIDFLGVGAM

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MAKNCVIYNT EENQNSSRSS SSPLSCYSSS YSQYCSSMGM VYADMGSLSL SPNLGVVSSP  60
ESYNISKCSE VENRRALWGF PLMEGGSKGS DSSEKANLDD ENLNENVMIS TGKETDSGQS  120
KLCARGHWRP AEDAKLKELV ALYGPQNWNL IAEKLEGRSG KSCRLRWFNQ LDPRINRRAF  180
TEEEEERLMQ AHRIYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS SAYRRRKLSQ  240
SIYRRMEENS SFVVCGEAIQ RADPPLTYCL NNLPSGGLGN VSTYPYGAFN GGNSNDGSGI  300
PYGLNFPPQI SSCGEAIISS SKVQSANTGF CVQETPYEFF PGANNRGWEY MRSNIDEAQT  360
QSGGVVLHQN ANLYQNFHQS FSNSTVSTSQ ASAGDRPSSS GAAEQNATSH FDKIGTNPPP  420
FIDFLGVGAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.2	1e-77	MYB family protein