PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON54056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 208aa MW: 24297 Da PI: 7.5813 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.3 | 4.9e-17 | 28 | 112 | 9 | 99 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+++ l++p kf++++g ++ s + ++ + g +W++kl +kk+++++l++GW +F+k ++ g +v+F++dg+sef + +f++ PON54056.1 28 ETLQENKLRIPHKFTRKYG--ETLSNSMFVKLPCGSKWKMKL--TKKDNKIWLEEGWPDFAKHYSIRRGSMVMFRFDGNSEF--HAVIFDT 112 4566778***********9..458899***************..**********************************9999..7777765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 208 aa Download sequence |
MSFRHQRDHN QTVFSSGTPH FFSIILEETL QENKLRIPHK FTRKYGETLS NSMFVKLPCG 60 SKWKMKLTKK DNKIWLEEGW PDFAKHYSIR RGSMVMFRFD GNSEFHAVIF DTSTVEIDYP 120 YIPNHLDKPD IDLELRAPKE KVVEDDYVQI LDNLSPCPKR KENASLPCPQ PLKRMRMSPN 180 ECILENAMSK GDLQSSMPEM IGMENLLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-27 | B3 family protein |