PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54055.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 271aa    MW: 30322.9 Da    PI: 8.6778
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-1110783399
                -SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 33 sktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +  l++  +  r+W+v++++  + ++    +++GW  F+++n+L++gD+++F l ++ +++++v +fr+
  PON54055.1 10 DAILIVSCQGRRTWSVNFSFIVHEKTltARFKSGWITFARENNLEVGDVCIFVLLESIKTTFKVVIFRA 78
                33344444666*******99555555448999*********************9988777799999987 PP
2B356.93.9e-18164260197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ffk+l++  +  s+ l lp kf++++ +++ +   + l  ++grsW+ kl+++   ++     l+kGW eF+k+n+L +gD+++Fkl +r+  ++ v++
  PON54055.1 164 FFKILMQRTYIGSRYLQLPIKFVNAYIKNQ-G--GVFLSVPNGRSWDAKLRITPPESMncvARLGKGWTEFAKDNNLGVGDVCIFKLLHRTAISFEVSI 259
                 99*********************9995553.3..39999***********994444444558899*********************9988777777777 PP

                 E CS
          B3  97 f 97 
                 +
  PON54055.1 260 V 260
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MRHLKNKSND AILIVSCQGR RTWSVNFSFI VHEKTLTARF KSGWITFARE NNLEVGDVCI  60
FVLLESIKTT FKVVIFRANG NCPIAPAHED GAIQVKAEEI LTNETLSGGA INDETGKPSS  120
LNSFPAKQAS GCISNPLKSS QLPLSLTERE RILDSIPFES EEPFFKILMQ RTYIGSRYLQ  180
LPIKFVNAYI KNQGGVFLSV PNGRSWDAKL RITPPESMNC VARLGKGWTE FAKDNNLGVG  240
DVCIFKLLHR TAISFEVSIV RFAEYDCLPW S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-11B3 family protein