PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54050.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 554aa    MW: 63496.6 Da    PI: 9.6002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.7e-14311091398
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 s+  ++pk f++++g  ++ s  + ++ + g +W++kl  + ++++++l++GW eFv+   ++ g  ++F+++g+se   +v vf+
  PON54050.1  31 SS-QRVPKYFVKKCG--ETLSDSVFVKLPCGSEWKMKL--TENDDKFWLETGWPEFVEHYSIRRGNLLTFRYEGNSEL--HVVVFD 109
                 44.367********9..458889***************..********************************997766..888886 PP
2B3521.3e-16255341187
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 f+k+l+++++     l+++ +fa+++ +k+  s  ++l+ ++gr+W+vk+i+    + ++  + +GWkeF ++n+L++gD++ F l + 
  PON54050.1 255 FCKILMQPSYVHGTYLSFSSNFATRYIKKT--SCNVILKALDGRTWTVKYIFgvYDRLRTARFISGWKEFSQDNNLEVGDVFAFVLLEG 341
                 899**9999999999***********7664..457***************997744444466778*******************97653 PP
3B349.86e-16421521198
                 EEEE-..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 ffk  ++s++  +    r+ +p +fae++ ++ e+  +++l  ++grsW  ++++   r ++++  + +GWk+F+ +n+L++gD+++F+l + +e ++ 
  PON54050.1 421 FFKFVIQSSYACNgasLRVPIPLDFAERYLKN-EG--DVVLSVPNGRSWFCQFKFrslRTGKQEAEIYGGWKDFAVDNNLEVGDVCIFELLDGTEISFQ 516
                 67777777776664435789*********655.33..7***********9999888888888889999*********************8766766678 PP

                 EEEE- CS
          B3  94 vkvfr 98 
                 v+++r
  PON54050.1 517 VSIVR 521
                 87776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MHYCVFDIVL VMLKFNFRNP LYKPFKSVFF SSQRVPKYFV KKCGETLSDS VFVKLPCGSE  60
WKMKLTENDD KFWLETGWPE FVEHYSIRRG NLLTFRYEGN SELHVVVFDI NTVEIDYPSG  120
PIHFDEKFRA PKREVIDADF ADILDDFSPC PKTRVESSLP CSPPPKRMKI YPTCKAQSNL  180
SHTTGTVSDH SETVVENRMS RGSSKNWKLD SLSESYGDKS RQKKSKILER MKPLRRQEKY  240
AALRKASGFK SKRPFCKILM QPSYVHGTYL SFSSNFATRY IKKTSCNVIL KALDGRTWTV  300
KYIFGVYDRL RTARFISGWK EFSQDNNLEV GDVFAFVLLE GIKITFHVLM RVEPEQNPTN  360
ETKSGRTVNG ENSIPISHKN LSTKQANGCI ATPLKTRRRH LNGIEKARIL ERAPFESENP  420
FFKFVIQSSY ACNGASLRVP IPLDFAERYL KNEGDVVLSV PNGRSWFCQF KFRSLRTGKQ  480
EAEIYGGWKD FAVDNNLEVG DVCIFELLDG TEISFQVSIV RVADDAHRQS SRATKSAQGA  540
TKPKQDVKIE IDGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-33B3 family protein