PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON53820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 180aa MW: 21309.2 Da PI: 10.0554 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 184.6 | 2.4e-57 | 25 | 154 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++k+++l +vik+vd+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk+++s + PON53820.1 25 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKDVDLYKIEPWDLQElcKIGSdEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS-R 121 69****************************.9***************954555553555**************************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle PON53820.1 122 HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 154 89*****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MLSHKERRVK SPKIWESTMN TFTHVPPGFR FHPTDEELVD YYLRKKIASK RIDLDVIKDV 60 DLYKIEPWDL QELCKIGSDE QNEWYFFSHK DKKYPTGTRT NRATKAGFWK ATGRDKAIYS 120 RHSLIGMRKT LVFYKGRAPN GQKSDWIMHE YRLETNENGS TPQATPQLNI NNHIRLYLSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G12260.1 | 3e-99 | NAC family protein |