PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53727.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 293aa    MW: 31644.9 Da    PI: 5.9854
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10170217455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PON53727.1 170 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 217
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDPPVLMNEG SFSNANAGSY NLAEIWPFHM NGGGEPGVGL GLRRPHFGQN LAPFGDVSGA  60
SREASANDPM NLDQNGSHGG GGGGSRKRPD VEDDSAKGVS TSSGNGNGNG LYDCDGKRLK  120
TSGCKDENGE SKAEAEQSSG KPEEQTTRPN DPPKQDYIHV RARRGQATDS HSLAERARRE  180
KISERMKILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV EFLSMKLEAV NTRMTPGVEV  240
FPSKDINLAS QYSQQTFEAA GMAFNSQPTR EFSRGSSPEW LHMQVGGGFE RTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-86bHLH family protein