PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON53641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GRF | ||||||||
Protein Properties | Length: 386aa MW: 43851.5 Da PI: 7.6846 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78 | 9e-25 | 77 | 120 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e PON53641.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP | |||||||
2 | QLQ | 57.6 | 3.8e-20 | 8 | 42 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+Pp+L++ i+ PON53641.1 8 PFTASQWQELEHQALIFKYMVSGIPIPPDLIFTIK 42 8*****************************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MSGKNRFPFT ASQWQELEHQ ALIFKYMVSG IPIPPDLIFT IKRSYMDSAV LPSKLFPHHS 60 QHVGWNCFQM GLGRKIDPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTGTNP NSNSKPNPSS VTPTLVSSIT KTLSNNSRSS LSSLPSEAQN RGHLHPSCFH 180 NPHLDHHSLD LYHHCSSCSR PPGLVLSSQD SNTSLLFDSG SYSNADLRSR YVYGLKEEVD 240 EHSFFSEEPS GTHVRDLSMD DTWQFTPLTM SCSSSSSKQR NFSGSQNEHS YLQLQSSTHG 300 YKQHNEQDQQ HCDLMGNDVK MERKEETQKT IHFFDEWPVK EKDSWLDLDD KSSNSGSVST 360 TQLSISIPTS SYDFPIFNTS RTHNGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 4e-56 | GRF family protein |