PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON53593.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 552aa MW: 62029.1 Da PI: 7.1382

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON53593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7e-33	212	269	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct +Cp+kkkvers d++++ei+Y+g+Hnh+k PON53593.1 212 EDGYNWRKYGQKSVKGSENPRSYYKCTNLNCPMKKKVERSL-DGQITEIVYKGTHNHPK 269 7**************************************.*************85 PP
2	WRKY	106.5	1.4e-33	377	435	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++d ++v++tYeg+Hnh+ PON53593.1 377 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHDMRAVITTYEGKHNHD 435 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MTFSLTDLLA NNNINMDNNN ISQENTRLNW GFSDQNEIDI PRFKTLQPSS LPLSSPTPFS 60 HSSYLANSSS VFSPSEFLNS PMFLSASNAL PSPTTGAFAG QTFDWRSNSK DKQQQMEEEE 120 NFFSDFSFQP QTGPVSMEKP MERPQQQQQK QAWEFDFNKP TKQSSFPLEK VEVKSELSSN 180 QSFSSEMAKT QMTLPQTHYA QPSQYVKEQK SEDGYNWRKY GQKSVKGSEN PRSYYKCTNL 240 NCPMKKKVER SLDGQITEIV YKGTHNHPKP QSTRRTSSSH SITHQNPSYT NSGGVSDHSG 300 QTFSNAVHED YSSDSIGEET FDRNSPTFNS VGDHDENEPE AKRWKGENEN EVFSASANRT 360 VKEPRVVVQT TSEIDILDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCPV RKHVERASHD 420 MRAVITTYEG KHNHDVPAAR GSSSYAMNRA APNNTSNGVV TMPHRPLPLV NHSNHSNYSS 480 SVLSTRLPNS VVTQQPHTLQ MLQGSGSLGL SGFGKPAGMY PPRSEPEGVF FKAEEVRNTE 540 QKDDTFFDSF LG

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MTFSLTDLLA NNNINMDNNN ISQENTRLNW GFSDQNEIDI PRFKTLQPSS LPLSSPTPFS  60
HSSYLANSSS VFSPSEFLNS PMFLSASNAL PSPTTGAFAG QTFDWRSNSK DKQQQMEEEE  120
NFFSDFSFQP QTGPVSMEKP MERPQQQQQK QAWEFDFNKP TKQSSFPLEK VEVKSELSSN  180
QSFSSEMAKT QMTLPQTHYA QPSQYVKEQK SEDGYNWRKY GQKSVKGSEN PRSYYKCTNL  240
NCPMKKKVER SLDGQITEIV YKGTHNHPKP QSTRRTSSSH SITHQNPSYT NSGGVSDHSG  300
QTFSNAVHED YSSDSIGEET FDRNSPTFNS VGDHDENEPE AKRWKGENEN EVFSASANRT  360
VKEPRVVVQT TSEIDILDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCPV RKHVERASHD  420
MRAVITTYEG KHNHDVPAAR GSSSYAMNRA APNNTSNGVV TMPHRPLPLV NHSNHSNYSS  480
SVLSTRLPNS VVTQQPHTLQ MLQGSGSLGL SGFGKPAGMY PPRSEPEGVF FKAEEVRNTE  540
QKDDTFFDSF LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-105	WRKY family protein