PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52827.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 535aa MW: 59846.4 Da PI: 6.4554

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20	1.3e-06	352	387	6	45
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45 +++Er+RR ri +++ +L++l P+ +k s a++Le PON52827.1 352 SIAERNRRTRISERIKKLQDLCPNM----DKQTSTADMLE 387 689*********************6....56788888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MSILYSPRFK CSEVELGKSY PEFMDNLSFG HGHQQMIQQQ SSTVTRYCSA PSSFMATLLE 60 NNDNDHSSDG LDGGSEDYYR DLGPSSPEVD TMLERFISAC NESENSGERS AMKQEPRDYS 120 INGSQVQVQA QVQAQAQAQA QAHQIHSSHR NYSVDSAALV GSNLETSFGV FSYVGLENSI 180 QTKMVPRNNR SNLVRQSSSP AGFFTDLAPE NGFDKMRRGR RVDSQLNFSS CSASNSRRMP 240 QIAENGNEDS ETENRNESNS HYIPNFRSDS WDESAFNGLK RSRDPNDVNM FSTSTELEMQ 300 NTEFGNSSRG LTHHLSLPAT FERAPREKVL HFQGTVPCKM RAKRGYATHP RSIAERNRRT 360 RISERIKKLQ DLCPNMDKQT STADMLEYRA VTSAYYRGAV GAMLVYDITK RQSFDHVARW 420 LDELRGHADK NIVIMLVGNK SDLGTLRAVP IEDAKEFAQR ESLFFMETSA LESTNVESAF 480 LTVLTEIYRV VSKKALIAND EQEPVGSSSL LKGTKIVVPG QEPAPVGSYS CCKYS

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MSILYSPRFK CSEVELGKSY PEFMDNLSFG HGHQQMIQQQ SSTVTRYCSA PSSFMATLLE  60
NNDNDHSSDG LDGGSEDYYR DLGPSSPEVD TMLERFISAC NESENSGERS AMKQEPRDYS  120
INGSQVQVQA QVQAQAQAQA QAHQIHSSHR NYSVDSAALV GSNLETSFGV FSYVGLENSI  180
QTKMVPRNNR SNLVRQSSSP AGFFTDLAPE NGFDKMRRGR RVDSQLNFSS CSASNSRRMP  240
QIAENGNEDS ETENRNESNS HYIPNFRSDS WDESAFNGLK RSRDPNDVNM FSTSTELEMQ  300
NTEFGNSSRG LTHHLSLPAT FERAPREKVL HFQGTVPCKM RAKRGYATHP RSIAERNRRT  360
RISERIKKLQ DLCPNMDKQT STADMLEYRA VTSAYYRGAV GAMLVYDITK RQSFDHVARW  420
LDELRGHADK NIVIMLVGNK SDLGTLRAVP IEDAKEFAQR ESLFFMETSA LESTNVESAF  480
LTVLTEIYRV VSKKALIAND EQEPVGSSSL LKGTKIVVPG QEPAPVGSYS CCKYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-38	bHLH family protein