PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52709.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 292aa MW: 31015.3 Da PI: 7.3902

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.8e-11	11	54	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +W+ e d+ + +a + ++ + +W++Ia+ ++ g+t +++k+++ PON52709.1 11 SWSREQDKAFENALATYPEDssdRWEKIAADVP-GKTVEEIKHHY 54 7******************************.********9 PP
2	Myb_DNA-binding	42	2.1e-13	121	165	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky PON52709.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MTVDEGVSSS SWSREQDKAF ENALATYPED SSDRWEKIAA DVPGKTVEEI KHHYDLLVDD 60 INLIESGCVP LPSYNSSSEG SSSHAGDEGT NKKGGHSGQY NSESNHGSKS RSDQERRKGI 120 AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS 180 IHDITSVGNG EIAGPQGPIT GQANGPPGGA SGKSSKQPPQ PAPGAPGVGM YGAPTIGQPI 240 GSLVSAVGTP VNLPAPPQMA YGVRAPAGTV VPGASMNMGS IPYPMPHTSA HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-125	MYB family protein