PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON52634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 458aa MW: 49303.7 Da PI: 6.6848 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2.1e-20 | 221 | 270 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g PON52634.1 221 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 270 7********.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MCLKVANQRS PNDVSFPPQE QGHGGEDQDE EQDQHNQQQQ RVNILSQYGV VSLPQPPPQQ 60 QQIFTGYSRP TEMSAIVSAL THVVSGRRGG DYWGYDSHLV GDVGSGQVYA SPSSSTSSSY 120 SPAFSGITSP GSGSGSWSGQ KRGRDEQASA QVRIESAPTR VFRGLGDFRA TPEESSSASA 180 TEEVTNTMTA TAAAATTAAI VPGMPSSETA QQEETGERRR RYRGVRQRPW GKWAAEIRDP 240 HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN VRSFPPPHQN SPAPAPTHLS 300 ISDSPATLVA AQPNLFQTTP FHGGGSSDTL RDYIQYSQLL QSSGDFSGQG QHLLQQQIPQ 360 QPSSFLEQML YSSQLASLQS PMMISSSSAA SSSLFRSSVS SSSSSSSVSY PLFFSSQLHQ 420 QQPGFYRSPE NQNPATSSSF PAPPWSSPPG YNPPSSSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 217 | 222 | ERRRRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 1e-13 | ERF family protein |