PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON52342.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 329aa    MW: 35782.3 Da    PI: 5.9644
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON52342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.17.4e-33162219259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+
  PON52342.1 162 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTIVITTYEGQHCHH 219
                 8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MPTGASTVRA GTEFGSESSW THLGADSDDV DGVYLFSAGD RESSILSEFG WNFHQEYDDQ  60
PSRAAAEAEP DERLGSLERS VDLAEGADFR SPEPETAAPI GSSTSNNPSV SSSSSEDPPE  120
KSTGSGGKPP PEIPNKVKKK GQKRMRQPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF  180
PRSYYRCTNS KCTVKKRVER SSDDPTIVIT TYEGQHCHHT VGFPRGGIIA HHEAAAFPGG  240
HLPPPISKFY YPTIHSTLLT TTETNNNNPD HLLTNITALS NQVFTGEAGD SGRVVVKEST  300
STTTSDLVLP VPDDQGLLGD IVPPGMRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.24e-67WRKY family protein