PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON52284.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 403aa    MW: 43896.1 Da    PI: 6.4068
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON52284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-21174223255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae+Aa+a+++a+++++g
  PON52284.1 174 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEGAARAYDEAALRFRG 223
                 8********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MCVLKVANSR DRKLTINTNE EYWANEPPGF FGEPVMAPGF GPMDREREMS AMVSALTRVV  60
SGDLPDQHHS NQRSDVSGSA SSDVGSGSYG SKRAREEEGG GDDMSSESVL GLCRAFGDQQ  120
FSNQGSSNSV LGGAETSYIW TTTIVPPPQT TSFTPTYEYQ EITQRQQQEQ PRRKYRGVRQ  180
RPWGKWAAEI RDPFKAARVW LGTFDTAEGA ARAYDEAALR FRGNKAKLNF PENVRLRSHS  240
GNPDATQLAV SDSPNTLLSI STSTEPIVHS QTQAQLLQSS CTTLPSSSND VVLRNLQSYS  300
PQVFGSERRT ISLYDQMVMS HSMAASSSSS LSTPSSSSPF SSSSSSSSSS PQLPSISPYF  360
WAQPPVQVPV QQFRPAGPHE SSSLSNLPAE QWTSSSHYTT SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-24ERF family protein