PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51943.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 262aa    MW: 29094.8 Da    PI: 5.1208
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.5e-09103149554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRdr+N++f eL   + +    + +K +Ka+iL  Av+ + +L
  PON51943.1 103 KACREKLRRDRLNERFLELVAAMEPG---RLPKTDKAAILSDAVRILTQL 149
                 5689*********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MNVASSENTN WLYDYGLMED VGVPGGEFPV PGTGFIWPQQ PLNASPDASV EVECSFGDSE  60
SLKEVGSGKR AEVDCSSGDS DSVKEVGSRK RQRSESIGAS CSKACREKLR RDRLNERFLE  120
LVAAMEPGRL PKTDKAAILS DAVRILTQLR SESRQLKETI DDLQERIKEL KAEKNELRDE  180
RQRLKEDKDR LEQQVRVAMT SQTSFLPHSP AIPTAELAAQ GQSASNKLMP FISYPSGVTM  240
WKLMPQTTLD TSQDHVLRPP VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-84bHLH family protein