PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51934.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 359aa    MW: 39352.9 Da    PI: 8.2054
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.26.2e-08216259755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 e  r+RR+++ ++   L++llP++     kK++ a++Le+A +Y+k Lq
  PON51934.1 216 ELARKRRQKLSDKTRCLQKLLPWD-----KKMDMATMLEEAYKYVKFLQ 259
                 667********************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MENGSESFQG DTHAGAGAEC YDEATFDTMF SGVSLLSLLG ASDEANTVLT TMPPPLFGDF  60
AIPPLDYSPT QSQPPPPPTP QPPLTHFPAM FGFYNGAASG SLMFPKAEPL GFEDLSVLTH  120
NLPDLLSLEG TITDHDSPFR PSLLHQKRAR VDSASRYRVP TAVLAHQALN SLEVTRRRRL  180
PLIPSYTPPP RPSSSTKAPA VASSSSSPPM IPRGSELARK RRQKLSDKTR CLQKLLPWDK  240
KMDMATMLEE AYKYVKFLQA QLTALKAMPN NCPGADAAVM QRLNGFTDLD DEFAGLERLT  300
RNQLLQVLVN SPAVQTKLYS QGCCVYSVEQ MGVLENVTAM RRRRRTGSNP LPPLPFSSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1341346RRRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.17e-27bHLH family protein