PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON51915.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | bHLH | ||||||||
Protein Properties | Length: 227aa MW: 25804.3 Da PI: 6.0517 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.2 | 2e-10 | 74 | 120 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR++i++++ L++l+P + +k Ka+iL + ++Y++ Lq PON51915.1 74 HSLAERARREKIRERLLFLQSLVPGC----DKITGKAQILDEIIKYVQLLQ 120 999**********************9....899***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MEKRERIMIA KEEGEDKGKN KQKKPNGSFT NPEENRTELP QVKKDKEIKS EHNEESPSGY 60 VHVRARRGQA TDRHSLAERA RREKIRERLL FLQSLVPGCD KITGKAQILD EIIKYVQLLQ 120 NQVECLAAML ASVNSTTDLE VDPFMGTQAP NQVHRKCCLE PPFPTVLDST SFPQFMITPT 180 PTPAPTCASL VLKEDQESTG DRELFSGQDY QSQELPIQCL HDFCMNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26260.3 | 1e-27 | bHLH family protein |