PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51377.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family G2-like
Protein Properties Length: 334aa    MW: 35682.6 Da    PI: 7.1001
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.52e-30120173155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PON51377.1 120 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 173
                 59*******************.********************************8 PP
2Myb_DNA-binding47.93e-15122172148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
       PON51377.1 122 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 172
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MREDDSNWFS RWEEELPSPE ELMPLSQTLI TPDLALAFDI RNPNSNSSAI AIAAAANNGG  60
SPTRAQAHQP QLQQQQQPAP PSNNPLQPPS SAQPNSSEFG DSADLGSGAA GEEPARTLKR  120
PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG  180
LSGGSGGGGG GAGGGGLAAS ADPATDHLFA SSPVPAHFLH PGRPNSDHFL PFVPVATLQH  240
HHHHQQHMAA AAAAVAAHPQ LQTQYHRQVQ HFGSPPTNGG GQFEHPFLAR QSQQPVHRMG  300
QPVHNPVPGY VEDLESANAT GGRKALTLFP TGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.18e-75G2-like family protein