PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | LBD | ||||||||
Protein Properties | Length: 119aa MW: 13694.3 Da PI: 5.4314 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 34 | 8.5e-11 | 13 | 60 | 54 | 101 |
DUF260 54 redamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 ++a++s+ +eA++ ++dPvyG v++i++l++q++++++ela++++++ PON50858.1 13 PSQAADSVHFEAQCIMEDPVYGRVKIINELHRQIHNAETELAKTRTQI 60 56899**************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MISGRCAACM STPSQAADSV HFEAQCIMED PVYGRVKIIN ELHRQIHNAE TELAKTRTQI 60 AFMISYTNIT QQTHHDQLHD DVEFNFNLDS YFLQEKSTNI TDRSSHCPST QPVPWFVYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 8e-12 | LBD family protein |