PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 777aa MW: 85221.2 Da PI: 6.2455 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.8 | 1.2e-20 | 54 | 110 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++k +++t++q++eLe++F+++++p++++r eL+++l L+++qVk+WFqNrR+++k+ PON50831.1 54 KKKYHRHTPKQIQELEAFFKECPHPDEKQRLELSMRLALETKQVKFWFQNRRTQMKN 110 79999*************************************************995 PP | |||||||
2 | START | 187.1 | 9.2e-59 | 282 | 505 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 la++a++el+k+a+ae p+W +s+ e +n +e+ ++f + + + +ea r++ vv+ + lve+l+d + +W e+++ +a+t++ is PON50831.1 282 LALAAMDELMKLAQAEGPLWIRSAgggkETLNHEEYARTFLPCIGtkpsgYVSEATRDTSVVIIHSLALVETLMDAN-RWAEMFPclvsRASTIDMISA 379 6899**************************************998999*****************************.********************* PP T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS START 88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179 g galq+m aelq+lsplvp R f+R+++++ +g+w++vdvS+d +++ + s+ +++lpSg+l++++++g+skvtwveh +++++ +h+ PON50831.1 380 GvggtrnGALQVMHAELQVLSPLVPlRPLKFLRFCKKHADGVWAVVDVSIDINREALNADSYFHCRRLPSGCLVQDMPDGYSKVTWVEHSEYDDSGVHQ 478 *******************************************************988***************************************** PP HHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 180 llrslvksglaegaktwvatlqrqcek 206 ++rs+++s++ +ga++w+atlqrqce+ PON50831.1 479 IFRSFLRSCMGFGAQRWLATLQRQCEC 505 *************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 777 aa Download sequence |
MDKHGEMGLL GENFDLGMIG RIRDEGYESR SGSDNLEGAS GDDQDAGDDQ PPRKKKYHRH 60 TPKQIQELEA FFKECPHPDE KQRLELSMRL ALETKQVKFW FQNRRTQMKN DVNCFSNGKM 120 ANLNQTQLER HENIILKQEN DKLRAENNMM KDAMSNPMCN QCGGPAIPGQ ISFEEHQLRI 180 ENARLKDELN RICALANKFL GRPLSSLASP ITLPSSTAGL ELAVGRNGIG GLNAVGPPLP 240 MGLDLGDGVS SSAHMIPLVK PSMGMNMMGN EIPFQRSMFI DLALAAMDEL MKLAQAEGPL 300 WIRSAGGGKE TLNHEEYART FLPCIGTKPS GYVSEATRDT SVVIIHSLAL VETLMDANRW 360 AEMFPCLVSR ASTIDMISAG VGGTRNGALQ VMHAELQVLS PLVPLRPLKF LRFCKKHADG 420 VWAVVDVSID INREALNADS YFHCRRLPSG CLVQDMPDGY SKVTWVEHSE YDDSGVHQIF 480 RSFLRSCMGF GAQRWLATLQ RQCECLATLI SPSVANNDQI AISPGGRRSL LKLAKRMVDN 540 FCAGVCASTV RKWDKLRVDN VGEDVRVMTR KSMDDPGEPP GIILSAATTV WIPVSQDRLF 600 EFLRDERMRS EWDILSHGGP MQEMVHITKG QRRGNHVSLL RASSIGSNDS TMLILQETWT 660 DPSGSIVVYA PVDTTAINIV MHGGDSAYVA LLPSGFAILP DGSSQSSYVA ANNEDGPSVK 720 GEANDGSGDG GGCLFTVGFQ ILVNSLPSAK LTVESVETVN NLISCTIDKI KAALNRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |