PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50813.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HSF
Protein Properties Length: 315aa    MW: 35103.3 Da    PI: 5.1739
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.24.2e-36231132101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+++g++f+v++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF++++F++g+k+ll++i+
    PON50813.1  23 FLTKTYQLVDDPAIDDVISWNDDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDYFRRGEKRLLCEIQ 110
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    PON50813.1 111 RRK 113
                   *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAAETNGDSS AAFDSQRPLP TPFLTKTYQL VDDPAIDDVI SWNDDGSTFI VWNPTVFARD  60
LLPKYFKHNN FSSFVRQLNT YGFRKVVPDR WEFSNDYFRR GEKRLLCEIQ RRKIAIPPAT  120
TASPAAVTVA AIPTARPIIS PSNSGEEQVI SSNSSPVRAP AELVDENERL RKENQQLTKE  180
LAEMKSLCSN IFSMVSSYAC GKSESGFLAR ESGFREVKPL DLMPGKRFGG ETEEAEAMAD  240
GKKTSPKLFG VTIGKKRGRD DDGGDAAEED VEDETDLRLH QPAGGVDVKS EPLDVDHQEK  300
PWLKQCHRTN QRVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-87HSF family protein