PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 26713.7 Da PI: 6.7414 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.3 | 0.00031 | 192 | 228 | 13 | 54 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 R+r+++ Lr ++P + ++ +++L +Av+Y+ksL PON50804.1 192 RQRMKKMVKALRGIVPGgN------EMTTVTVLDEAVQYLKSL 228 6888889999******955......8***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MQHNHQFYPG KKAPPLEYQV GNNHMHVPVA SAFGAVLPPP GNHLKHFHGV EFQPSEVCPK 60 NFIIFDQTDH RSQIVFHPAI AHKFGSPGLN MDGAYLRSYF GGRDRNDEGG EISSPLKEDS 120 DDIDALLSLE EEEQDEYDEE EISTARTYGN YGSSSPESCS NYGLKTKKNT SSSSIQKSSG 180 SGSSGCNSER KRQRMKKMVK ALRGIVPGGN EMTTVTVLDE AVQYLKSLKV EVQKLGVGNQ 240 KH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 6e-44 | bHLH family protein |