PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50523.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 410aa MW: 44431.3 Da PI: 7.0137

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00052	271	309	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PON50523.1 271 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 309 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MNRAGVLQSS PVQQMMAAGN PNWWNINAMR PPTQPVLPSP SFLYPQFIPT TTTTTTATTT 60 TTTTSNSSSS SSANSSHHEL PNIPSWAHDN NQDQLPESWS QLLLGGLAVG EEEKANNMMS 120 HFQVKKLENW EDHHPHYHQQ MLSSTTQASN ASVHMVDHVK QENSAAYVYG HGSQEFQAKP 180 GGGGCGAWLS HQHQIMMANN SNSSPKSSCV TSFSSNMLDF SNISKADHHT TTHPPLLSDR 240 SSECNSTATG GAPLKKARVQ PSSAQNTFKV RKEKLGDRIT SLHQLVSPFG KTDTASVLLE 300 AIGYIRFLQS QIEALSLPYL GSGSGNMRQQ QSVHGERNCM FPEDPGQLLN DNCMKRKGAP 360 DQQDSLEEPK KDLRSRGLCL VPVSCTLQVG SDNGADYWAP ALGGGTGGGF

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MNRAGVLQSS PVQQMMAAGN PNWWNINAMR PPTQPVLPSP SFLYPQFIPT TTTTTTATTT  60
TTTTSNSSSS SSANSSHHEL PNIPSWAHDN NQDQLPESWS QLLLGGLAVG EEEKANNMMS  120
HFQVKKLENW EDHHPHYHQQ MLSSTTQASN ASVHMVDHVK QENSAAYVYG HGSQEFQAKP  180
GGGGCGAWLS HQHQIMMANN SNSSPKSSCV TSFSSNMLDF SNISKADHHT TTHPPLLSDR  240
SSECNSTATG GAPLKKARVQ PSSAQNTFKV RKEKLGDRIT SLHQLVSPFG KTDTASVLLE  300
AIGYIRFLQS QIEALSLPYL GSGSGNMRQQ QSVHGERNCM FPEDPGQLLN DNCMKRKGAP  360
DQQDSLEEPK KDLRSRGLCL VPVSCTLQVG SDNGADYWAP ALGGGTGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	7e-97	bHLH family protein