PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50174.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 352aa    MW: 37846.3 Da    PI: 6.1548
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17250283134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  PON50174.1 250 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 283
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MIGPNFMDEI DCGSFFDHID DLLDFPGDDV DTSLGPSTDT NAFPSIWSTQ SDSLPGSDSV  60
FSGNSASDLS AELSVPYEDI VQLEWLSTFV EDSFSGGSLT INKEEESSLN KDSPRQQFQT  120
SSPVSVLDSS SSCSGGKSGG PRSPETTTPG GGRRGRARSK RPRPATFNPR PAIQLISPTS  180
SVVEAPQLLI AAPKSSSDSE NNFAETRPMI KIPKLVPVDQ KKKKKIKLTF PAAPAAETNQ  240
NQTSQAVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP AASPTFVPSL  300
HSNSHKKVLE MRTKSGEMVG VAGNATATAT SMNDAMQELI PNTNSSISLD YM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-42GATA family protein