PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50150.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 550aa MW: 59748.5 Da PI: 7.3985

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.6	1.4e-41	174	249	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls++k+yh+rhkvCevhsk+++v+v+++eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q PON50150.1 174 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNNMEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 249 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MESWSYVSEG KGYVSEETIS PFNSLGRSKN ALLGWDVKTP CTFGNSMLVS SQQGIENQGF 60 GEYIDMMGKQ VASNSVGDVL TDSKVCGGKL IDPTIAIAFS GEDESTSRIS SSVLDSSSWD 120 SSLIDLKLGN IGDRRDISGS KVSKGASAGL SSSESSTPPK RIRLSGLNSQ TSFCQVYGCN 180 KDLSSCKDYH KRHKVCEVHS KTAKVIVNNM EQRFCQQCSR FHLLAEFDDG KRSCRKRLAG 240 HNERRRKPQA GIHSGRAGRM LQSYNDSRFQ GTASFICQDI LPSGIFNPDK YGTSNWCGHI 300 KVEDVSDYRP LSTVPVTSEH PRSKVHFPRD IGKQFPSFHE SGANAVTASV FSLHGSHYQH 360 ELGGPDSSSR PFFHNNILGS EDFNNFNTAS TIQGFLGTSD SGCALSLLSS QSQNSSSHLS 420 GIPMAHPLDK QGSHTCYNMS QVFGKLVGAS SHASTSGVLN KIPSLGMNTM DGSHLSPIMI 480 SDGAGNVNFE ITDGIFQGSD FSNSKNRLSC EDGPTIGLLQ LSSQLQRVED QRQSMQMEQK 540 NDAFCCLHIT

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MESWSYVSEG KGYVSEETIS PFNSLGRSKN ALLGWDVKTP CTFGNSMLVS SQQGIENQGF  60
GEYIDMMGKQ VASNSVGDVL TDSKVCGGKL IDPTIAIAFS GEDESTSRIS SSVLDSSSWD  120
SSLIDLKLGN IGDRRDISGS KVSKGASAGL SSSESSTPPK RIRLSGLNSQ TSFCQVYGCN  180
KDLSSCKDYH KRHKVCEVHS KTAKVIVNNM EQRFCQQCSR FHLLAEFDDG KRSCRKRLAG  240
HNERRRKPQA GIHSGRAGRM LQSYNDSRFQ GTASFICQDI LPSGIFNPDK YGTSNWCGHI  300
KVEDVSDYRP LSTVPVTSEH PRSKVHFPRD IGKQFPSFHE SGANAVTASV FSLHGSHYQH  360
ELGGPDSSSR PFFHNNILGS EDFNNFNTAS TIQGFLGTSD SGCALSLLSS QSQNSSSHLS  420
GIPMAHPLDK QGSHTCYNMS QVFGKLVGAS SHASTSGVLN KIPSLGMNTM DGSHLSPIMI  480
SDGAGNVNFE ITDGIFQGSD FSNSKNRLSC EDGPTIGLLQ LSSQLQRVED QRQSMQMEQK  540
NDAFCCLHIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-47	SBP family protein