PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50148.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 534aa MW: 57755.7 Da PI: 5.8955

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.5	1.5e-05	417	454	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PON50148.1 417 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 454 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MAEEFQIQGG ICGGNWWGSS RSMFTVAASP CSVGSLGWPS HDMLDIKAAG AARSSSSSGE 60 ETDHNIFQEV AHDQDDDNHD HHNNIDQKPH LQITADNSSV TGSASILIDS TLQMMGFGLL 120 TSPISCTSSD FTNQTFVSRS SGRAESNNIY SMLQQDMGST NKLNYRQEFI GLDSSQIQKD 180 WSTSTNSTSP PKDFSAVSAD VVDVSINGFK PNIIQQDLSG LDQASSGNCM VTSQALSAGF 240 PAISAPFGYT SATLLQNLFE GETDSTHQQS YCNNYPSSGA NYGSSTIWPR FSPLILGSRT 300 SPPPPPPLKQ QQQQQPGALH FTNNTAFWNA SSPGLPNDGV FPSTTLPPPP RYVTQKFEEK 360 PKCNSLITSA KANSNEDVHD SGSVTKKSNS SSNGSDQPVL KRPRIETPSP LPTFKVRKEK 420 LGDRITALQQ LVSPFGKTDT ASVLHEAIEY IKFLHDQVSG LSTPYMKNNN GTSIPVRQQG 480 SINKLKDHQD ESSKQDLKSR GLCLVPISST FPVANETTAD FWTPTSSFGG TFMR

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MAEEFQIQGG ICGGNWWGSS RSMFTVAASP CSVGSLGWPS HDMLDIKAAG AARSSSSSGE  60
ETDHNIFQEV AHDQDDDNHD HHNNIDQKPH LQITADNSSV TGSASILIDS TLQMMGFGLL  120
TSPISCTSSD FTNQTFVSRS SGRAESNNIY SMLQQDMGST NKLNYRQEFI GLDSSQIQKD  180
WSTSTNSTSP PKDFSAVSAD VVDVSINGFK PNIIQQDLSG LDQASSGNCM VTSQALSAGF  240
PAISAPFGYT SATLLQNLFE GETDSTHQQS YCNNYPSSGA NYGSSTIWPR FSPLILGSRT  300
SPPPPPPLKQ QQQQQPGALH FTNNTAFWNA SSPGLPNDGV FPSTTLPPPP RYVTQKFEEK  360
PKCNSLITSA KANSNEDVHD SGSVTKKSNS SSNGSDQPVL KRPRIETPSP LPTFKVRKEK  420
LGDRITALQQ LVSPFGKTDT ASVLHEAIEY IKFLHDQVSG LSTPYMKNNN GTSIPVRQQG  480
SINKLKDHQD ESSKQDLKSR GLCLVPISST FPVANETTAD FWTPTSSFGG TFMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	4e-54	bHLH family protein