PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 101aa MW: 12215.9 Da PI: 8.7687 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31 | 6.1e-10 | 36 | 75 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++l+++ +++ G + W++Ia +++ gRt++++ +w PON50099.1 36 MTKQEEDLIYRMFTLVGER-WDLIAGRIP-GRTAEEIERFWT 75 69*****************.*********.*********995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
METCKGPCRR RKQTKHTNNF ESDQEVSSLE WEFISMTKQE EDLIYRMFTL VGERWDLIAG 60 RIPGRTAEEI ERFWTMRHHD IFAERRKKLK IESSKVDVPR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53200.1 | 5e-35 | MYB_related family protein |