PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50022.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 311aa MW: 34729.2 Da PI: 6.7971

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.7	3e-21	121	181	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e+++ l +++e++V++WFqNrRa+ k+ PON50022.1 121 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKEITSDLsqhgQISETNVYNWFQNRRARSKR 181 89***************99************************************97 PP
2	Wus_type_Homeobox	101	8.3e-33	120	183	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+ L+++G+i+++NV++WFQNr+aR+++kq PON50022.1 120 ARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRARSKRKQ 183 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MMGLGVGWEK QQQQQQEEAE QNGNVNVVGN GNGNGNVNNN NNNNSNNNNN NNGGGIPYVK 60 VMTDEQLETL RKQIAVYATI CEQLVQMHKN LTSHPDLPGV RLGNLYCDPL MTSAGHKITA 120 RQRWTPTPVQ LQILERIFDQ GNGTPSKQKI KEITSDLSQH GQISETNVYN WFQNRRARSK 180 RKQHNNSTTT PNNAESEVET EVESPKDKKT KPPHADNSAP PRPHHDICFH STPEMITSSD 240 LHFFDPPHPN KGDSIFPSNN TALRPPRNLA QLPFYDGLLS NPTRNDQLSG KMEVPGSYGL 300 YDHAEDYSMA G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	183	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-91	WOX family protein