PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50014.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Nin-like
Protein Properties Length: 332aa    MW: 38608.6 Da    PI: 9.2064
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.32.3e-26205254352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl
  PON50014.1 205 ARIALSDLAKYFDLPIVEASRNLEVGLTVLKKKCREFGIPRWPHRKIKSL 254
                 6899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDSSKTHFLL SLLIFKNTIN RELIRSLHVY RLINGMEKEV EREFVFSVNG AYVEMEADPL  60
LRLQKFEISE VFEGFVNGLW LCIFAFYAHH PPPPLLTCIP SLLTLSRNPK LRAIPSLAND  120
LETIFHMICV ADDKEPSRVL SERTCQRNNQ NHHQLRRNVP VLDQDLNCLP YPVTPSELSD  180
DQQIEQSSSG TMEKKKKRAT SKDIARIALS DLAKYFDLPI VEASRNLEVG LTVLKKKCRE  240
FGIPRWPHRK IKSLDSLIRD LQEEREWQQQ DNKAAAIAVA KRQSMLENER ESIEKKPFLE  300
MKTETKRFRQ DVFKRKHRAR VLGTQSLFLP DN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.14e-98Nin-like family protein