PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49264.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 351aa    MW: 38322.6 Da    PI: 8.58
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.11.2e-32176232158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh hA+rR+RgsgGrF
  PON49264.1 176 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHLHAMRRARGSGGRF 232
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MHQKPNGTNH PESDANGARN LQSTVSDSQP WWGSGMGHQA ISKGVFVGTA MTLSPPTHLN  60
GDLGTQTSNS SSQAKQGGPE EGSHGHVSKE LLQSDGKCGE EQQMQWVSPI TPPKMSDYLA  120
QPTQLELASH SIACVSYPYS DPYFGGVMPY GPHALVQSHC PGMPSARMAL PLDMAEEPVY  180
VNAKQYHGIL RRRQSRAKAE LEKKLIKVRK PYLHESRHLH AMRRARGSGG RFLNTKNTDG  240
TAHNATPDMN ANTSGAATST DPIISLRTKP VSCDSSSGHR ESTDTQEMYQ NKTYHSNVNG  300
NSCYLHHKGF QLSACHSLSG DHHRIEEGDL ISGQHRNRIM TNGTHMALSI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.12e-49NF-YA family protein