PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49018.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 257aa MW: 30208.2 Da PI: 4.5884

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEde+lv +vk++G ++W++ a+ g++R++k+c++rw++yl PON49018.1 16 KGMWLEEEDERLVSYVKLMGEKRWDALAKASGLRRSGKSCRLRWLNYL 63 688*******************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	72	114	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + eE+ +++++ +++G++ W++Iar+++ gRt++++k++w+++l PON49018.1 72 ISVEEENIILQLQERWGNK-WSKIARRLP-GRTDNEIKNYWRTHL 114 588**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MEYQAEAMQG EDQLRKGMWL EEEDERLVSY VKLMGEKRWD ALAKASGLRR SGKSCRLRWL 60 NYLRPNLKHG QISVEEENII LQLQERWGNK WSKIARRLPG RTDNEIKNYW RTHLRKKLTQ 120 VQEGNSKYEL EKAKEDILFK NKIDESVSTS DDKKWNGETD QYGSADQDLW GSSSWDNSSD 180 ASGVSADFAL TSSPYENRLI SDWISEFSNE QTREMNYYDE CNSAVFQSES SYLENWTPDD 240 HDQCDTWSCS VFLWDMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	5e-61	MYB family protein