PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48864.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 330aa MW: 35925.3 Da PI: 9.2627

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.8e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + PON48864.1 12 KGPWSPEEDEALRRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	58.3	1.8e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +v+a++++G++ W+tIar ++ gRt++ +k++w++ PON48864.1 66 PFTPEEDETIVRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MASTRKDLDR IKGPWSPEED EALRRLVQNY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 EVEHRPFTPE EDETIVRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMLEDS 120 NGDARDHHHH QPLKRSASVG APGTVETGGF VNPGSPSGSG LSDSSLPGMS LTQVFKPVPI 180 AGPPITPSSQ PHIDTSSDPP TSLSLSLPSS DSSEVSNRGS GSGFGSFQAG SPQMVHPHVP 240 QPPPLPPPQP PVAVVLLQQG EPGHVPSQGT CGQFGNEKQF FSAEFLAVMQ EMIRKEVRNY 300 MSGIERNGLY FHTDAIRNAV VKRIGVSKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-73	MYB family protein