PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48699.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 376aa MW: 42346.6 Da PI: 7.3079

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	193	239	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq PON48699.1 193 DHIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYVKQLQ 239 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MDVASARWLS EMAVEDYHNI FHQCEIHSLN QLGFASDDHT VGENYKKSLS SESYSSYSTV 60 TTKNNNPSIS TSSGSDSFKN SHQAMEKKPP FSSSSSQLLS FDQKYSNSPP NSKPHDHQQL 120 LIYGNLDNMS TTLKPKKEAV SQIDVHFSSH VITNKDSLIK KEDHSCEPIT AFTKGNNKRP 180 YSAMTRTPSH AQDHIMAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYVKQLQE 240 RVNILEEQTK KRTVESVVFV KKSHVSADDQ DSSSCDQNFD GRSHDQDDHQ ALPEIEARVS 300 EKDVLMRIHC EKQKGVAVKI LSEIEKLDHL SVVNTSVLPF GNSTLDVTII AKMDEEFSMT 360 VKDLVKNLRE ALLKFM

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MDVASARWLS EMAVEDYHNI FHQCEIHSLN QLGFASDDHT VGENYKKSLS SESYSSYSTV  60
TTKNNNPSIS TSSGSDSFKN SHQAMEKKPP FSSSSSQLLS FDQKYSNSPP NSKPHDHQQL  120
LIYGNLDNMS TTLKPKKEAV SQIDVHFSSH VITNKDSLIK KEDHSCEPIT AFTKGNNKRP  180
YSAMTRTPSH AQDHIMAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYVKQLQE  240
RVNILEEQTK KRTVESVVFV KKSHVSADDQ DSSSCDQNFD GRSHDQDDHQ ALPEIEARVS  300
EKDVLMRIHC EKQKGVAVKI LSEIEKLDHL SVVNTSVLPF GNSTLDVTII AKMDEEFSMT  360
VKDLVKNLRE ALLKFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	203	ERKRRE
2	199	204	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-66	bHLH family protein