PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48534.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 358aa    MW: 39183.9 Da    PI: 7.8679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.26.2e-08216259755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 e  r+RR+++ ++   L++llP++     kK++ a++Le+A +Y+k Lq
  PON48534.1 216 ELARKRRQKLSDKTRCLQKLLPWD-----KKMDMATMLEEAYKYVKFLQ 259
                 667********************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MENGSESFLG GTRAGVGAEC YDEATFDTMF SGVSLLSLLG ASDEANTVLT TMPPPLFGDF  60
AIPPLDYSPP QSQPPPPPPP TPQPPLTHFP AMFSFYNGTA SGSLMFPKAE PLGFEDLSVP  120
TNNLPDLLSL EGTITDHDSP FRPLLLHQKR ARVDSASRYR VPTAVLSHQA LNSLEVTRRR  180
RLPLIPSYTP PPRPSSSITA AAVASSSPPM IPRGSELARK RRQKLSDKTR CLQKLLPWDK  240
KMDMATMLEE AYKYVKFLQA QLTALKAMPN NCPGADVSVM QSLNGFTDLD DEFAGLERLT  300
RNQLLQVLVN SPAVQTKIYS QGCCVYSVEQ MGVLENVTAM RRRRTGSNPL PPLPFSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.19e-26bHLH family protein