PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 349aa MW: 39225 Da PI: 6.7198 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.7 | 3.1e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++ +G g+W++ ++ g++R++k+c++rw +yl PON48297.1 15 KGPWTPEEDKKLVDYITAHGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 9.5e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ ++++++ lG++ W++Ia++++ gRt++++k++w++yl PON48297.1 68 RGKFSEEEERIIIHLHSVLGNK-WSRIAAHLP-GRTDNEIKNFWNTYL 113 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MGRSPCCDEK ADLKKGPWTP EEDKKLVDYI TAHGHGSWRS LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEERIII HLHSVLGNKW SRIAAHLPGR TDNEIKNFWN TYLRKKLLHM 120 GIDPNTHKPR TDLNHLLNLS QLLSSSHLIM NTTSTTISTP LENALKLQAD AAHQYMAKIQ 180 MLQNLMQVMT SNSTISNTAQ NIESINPSTL LGVQNNLHIF EGQIMGYDQI QNLGNIVPVC 240 PNEYSKAIDM NPWASSESGG RTGGGDGVDH QKNSADDEGI HDQNIDQLPR LVSSAPFTGR 300 TSFSNHTENK SDHSAIVHSP TSTVFEDWEK LMDDESSESY WKDIIELTS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 259 | 265 | GGRTGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02940.1 | 3e-87 | MYB family protein |