PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48151.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 316aa MW: 34861.7 Da PI: 6.301

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.5	1.1e-38	37	137	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 aCaaCk++rrkCa+dCvlapyfp++ +++f n+hklFG+sn++k++++l ++ +++am++++++++ara dPv G++++i++lq+q++ +kael+l+ PON48151.1 37 ACAACKYQRRKCAPDCVLAPYFPHNTQRQFLNAHKLFGVSNITKIIRKLdSPVAKDHAMRTIIFQSDARAADPVGGCYRIIQDLQRQIDFAKAELDLVL 135 7**********************************************55666***************************************9886 PP DUF260 99 ee 100 ++ PON48151.1 136 QH 137 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MSLIPHTKTK TTATTTTPSS SSSSSSSFSK GSGNGQACAA CKYQRRKCAP DCVLAPYFPH 60 NTQRQFLNAH KLFGVSNITK IIRKLDSPVA KDHAMRTIIF QSDARAADPV GGCYRIIQDL 120 QRQIDFAKAE LDLVLQHLEL CRAAAAAAPP PQSTSSHDDH FYNDSMHSGL HHHQHDQFLH 180 PQVIHGELEA SRYVVVDQDG HEHLQDDVSS WVVQDSAMDV KPVTAAIGGV VGGDQDVYVG 240 KPLLDLPSDE KIINGVATNF EPHHHRDDEA MLRTVGHNVV LKQQNQDDHY SIQRNDEDDE 300 DLRDAATLFT LTNCTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-50	LBD family protein