PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48015.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 344aa MW: 38573.6 Da PI: 6.8339

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.1	7.7e-14	129	180	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k L+ PON48015.1 129 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKGLE 180 79**************************...9***************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MALEALSNSN ELFNFVIYDT ISATPCSYQD SSETTITNFL FNNDNTTAPT TLINPPPPPP 60 HHQDHQVGAL ETCSLTTRIR KRQMPREAAG GHDDDDHRDI KQSLGAVVVR KKRRRKPRVC 120 KNKEEAESQR MTHIAVERNR RKQMNEHLAV LRSLMPESYV QRGDQASIVG GAIEFVKGLE 180 YLLQSLESQK LQVLQGINNN GGSDHHDHDH EDSSNINSGI PKLLVPPPFA QFFVYPQYTW 240 SQISNNYTSN TNAAIADIEV TLIETHANLR IFSRRSPKQL SKLIAGFQTL HLTVLHLNVT 300 TLNALVLYSV SVKVEEACLL TSVDDIAAAV HHMLRIIEEE VALC

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MALEALSNSN ELFNFVIYDT ISATPCSYQD SSETTITNFL FNNDNTTAPT TLINPPPPPP  60
HHQDHQVGAL ETCSLTTRIR KRQMPREAAG GHDDDDHRDI KQSLGAVVVR KKRRRKPRVC  120
KNKEEAESQR MTHIAVERNR RKQMNEHLAV LRSLMPESYV QRGDQASIVG GAIEFVKGLE  180
YLLQSLESQK LQVLQGINNN GGSDHHDHDH EDSSNINSGI PKLLVPPPFA QFFVYPQYTW  240
SQISNNYTSN TNAAIADIEV TLIETHANLR IFSRRSPKQL SKLIAGFQTL HLTVLHLNVT  300
TLNALVLYSV SVKVEEACLL TSVDDIAAAV HHMLRIIEEE VALC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	116	RKKRRRK
2	110	117	RKKRRRKP
3	111	116	KKRRRK
4	130	141	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46690.1	3e-58	bHLH family protein