PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47982.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 319aa    MW: 35023.9 Da    PI: 6.5061
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.92.8e-18241274134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs+C++ kTp+WR gp g ktLCnaCG+++++ +
  PON47982.1 241 CSHCQVQKTPQWRTGPLGAKTLCNACGVRFKSGR 274
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MECMEAKALR PSLRTELTQQ EFLEEFYTAG AGVSCVPGDD FSVDELLNLQ NGEFEDGSLL  60
EEGEKDSLFV EDESFNVSGG YFGAGDSESV LTSELAVPDD DLAELEWVSH FVDDSLSEIS  120
LSHVPIGKQR TGVCTQNRCE PEARRTGTGP TCFPSVPVRT RTKRARPTTR TWPRSNSLSP  180
RTESESSSSS SFSSSPSLTF TNTAQTVEFL QNLGEPASKK QKKKPVQTGG GSAGVQFQRR  240
CSHCQVQKTP QWRTGPLGAK TLCNACGVRF KSGRLFPEYR PACSPTFCSD THSNSHRKVL  300
EMRKKKDPGS RLTHAISSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164RTRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-54GATA family protein