PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47845.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 492aa MW: 54053.7 Da PI: 6.7194

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24	7e-08	395	435	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L PON47845.1 395 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 435 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MDGDLGWGHG TVQAGTSTSS ALWTNHDHQH EVEQSFLVSN SSSTSSTIAV PQLQKAAHQK 60 LSSSPMVNNS SSVDIISNLS FSHGQESMSS IVNVKPGATT TWGQITLTAR DFCSSPYNII 120 SPFSDFMSGT PTGFGNINNV QSQAVVNAKA PVTTTTCSDL ESLDCLLSAT NSNTDTNSAE 180 DNGISMIFSD CRNFWNDING AGSAVSSGES ENNNKVSRDK GMDDNCQLTN HEVDETVSQS 240 TSSDRVVHIA QSQTRSIHGL SNHHKTHSMK RNNDDRQNYD NSMSFFNLLR SDISHTTEEG 300 QGFRLMPENS LPKQKKPRSE KRPPSSSNIN FQQPSNSSIS NSSVDQEPDP EAIAQMKEMI 360 YRAAAFRPVN LGLEMVEKPK RKNVRISTDP QTVAARQRRE RISERIRVLQ RLVPGGSKMD 420 TASMLDEAAN YLKFLRSQVK ALESLGQKID SMNCPPTNIA FSFNPSFPMQ THVPSPPLLQ 480 LQNPNQVHHY QS

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MDGDLGWGHG TVQAGTSTSS ALWTNHDHQH EVEQSFLVSN SSSTSSTIAV PQLQKAAHQK  60
LSSSPMVNNS SSVDIISNLS FSHGQESMSS IVNVKPGATT TWGQITLTAR DFCSSPYNII  120
SPFSDFMSGT PTGFGNINNV QSQAVVNAKA PVTTTTCSDL ESLDCLLSAT NSNTDTNSAE  180
DNGISMIFSD CRNFWNDING AGSAVSSGES ENNNKVSRDK GMDDNCQLTN HEVDETVSQS  240
TSSDRVVHIA QSQTRSIHGL SNHHKTHSMK RNNDDRQNYD NSMSFFNLLR SDISHTTEEG  300
QGFRLMPENS LPKQKKPRSE KRPPSSSNIN FQQPSNSSIS NSSVDQEPDP EAIAQMKEMI  360
YRAAAFRPVN LGLEMVEKPK RKNVRISTDP QTVAARQRRE RISERIRVLQ RLVPGGSKMD  420
TASMLDEAAN YLKFLRSQVK ALESLGQKID SMNCPPTNIA FSFNPSFPMQ THVPSPPLLQ  480
LQNPNQVHHY QS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	396	401	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	1e-50	bHLH family protein