PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47299.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 685aa    MW: 74582.6 Da    PI: 5.4553
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS327.13.5e-1003226842374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L ++Ae +++g+  laq +Larl++++sp g+p++R+++yf+eAL+  ++    ++ ++l+ s+ +    + ++ a+k+fsevsP+l+f+++t+ q
  PON47299.1 322 TDQLSKAAELIETGNPVLAQGILARLNHHVSPIGKPFRRAVFYFKEALQVLVHM---NTTNSLAFSPFN---LIFKIEAHKTFSEVSPVLQFANFTCTQ 414
                 689*************************************************99...666667777776...*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL. 194
                 aIleaveg +r+H+iDfdi+ G+QW++++q+La R+    +g ++l+iT+++sp+++++ el+  +e+L++fA+e+++pfe +++ + ++ + + + L 
  PON47299.1 415 AILEAVEGLNRIHVIDFDIGCGGQWASFMQELALRNggsiSGGATLKITAFASPSTHDEIELSFSQENLKHFASEINLPFELEII-SLEMLNSDSWPLp 512
                 ************************************77666689****************************************7.4444444455443 PP

        GRAS 195 .rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellg 291
                  rv++gE +aVnl++  ++ +  +++l+     vL++vk+lsPkvvv  e+ +d+++ +F  ++++al+ ys l++sl ++++  ++++ +k+Er ll+
  PON47299.1 513 lRVSEGEGIAVNLSIGSFSSY--PLPLPL----VLRFVKQLSPKVVVSLERGCDRTDVPFSLQIVHALNSYSGLLESLdAVNVNLDAHALQKIERCLLQ 605
                 39999**********988888..666665....*********************************************889999999************ PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +ei+++v  ++++     e+   Wr+ + ++GF+p+ +s+++++qa++l+++ + +g++ve+++ slvl+W++++L+s+SaW+
  PON47299.1 606 PEIEKMVLGRHRS----PERTLPWRSSFLNSGFSPLMFSNFTESQAECLVQRSQARGFHVEKKQSSLVLCWQQKELISASAWK 684
                 ********99998....99999************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MNKAMLPLPF EEFQGKGVLD FSSTASDSVL PPQKWNTLIT KENCYVGSEP TSVLDTRSPS  60
PPTSTSTLSS SLGSGGGGTG SVDTTTGPAL ALASSSDAPS GTGSALVEEK CGLGMEDWES  120
VLSESPGQEQ SIMRLIMSEV DDPSLGLNKL LQRGSVSQEM EFNAGGFGLV DQGFVFEPII  180
GTGTTCSDFQ FSAPNVQSYN ANSLLPVSPL AFHQQHQLVE HVEAKPQVFN AINQNQALVM  240
PLTYAQLQEH YGVSPPPAKR LNTGAVGANY QAQKVQFPNS GHEQLQLVHQ QRPTTMVVPK  300
QKAMSPAMGD ELGSHQLQQT LTDQLSKAAE LIETGNPVLA QGILARLNHH VSPIGKPFRR  360
AVFYFKEALQ VLVHMNTTNS LAFSPFNLIF KIEAHKTFSE VSPVLQFANF TCTQAILEAV  420
EGLNRIHVID FDIGCGGQWA SFMQELALRN GGSISGGATL KITAFASPST HDEIELSFSQ  480
ENLKHFASEI NLPFELEIIS LEMLNSDSWP LPLRVSEGEG IAVNLSIGSF SSYPLPLPLV  540
LRFVKQLSPK VVVSLERGCD RTDVPFSLQI VHALNSYSGL LESLDAVNVN LDAHALQKIE  600
RCLLQPEIEK MVLGRHRSPE RTLPWRSSFL NSGFSPLMFS NFTESQAECL VQRSQARGFH  660
VEKKQSSLVL CWQQKELISA SAWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-163GRAS family protein