PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON47286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | YABBY | ||||||||
Protein Properties | Length: 218aa MW: 24360.8 Da PI: 8.2545 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 229.1 | 1.2e-70 | 13 | 178 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkv.vtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvs 97 ++ s s+q+Cyv+CnfC+t+lavsvPs+slfk+ vtvrCGhC++llsvn++ + + h+++++ + lle+ ++ +n+ + +++ +++ v PON47286.1 13 HHLSPSDQLCYVHCNFCDTVLAVSVPSESLFKInVTVRCGHCSNLLSVNMRGLL-FPPNQLHFGHAFFTSqhLLEDIRSPPSNMLV--INQPNPNDFV- 107 68899***************************989************9988765.5677788899876542277888877776654..4444444333. PP YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + + ++ee+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ih gl PON47286.1 108 MPM--RGRTEEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHLGL 178 323..67999****999*****************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSASSAAAFS PDHHLSPSDQ LCYVHCNFCD TVLAVSVPSE SLFKINVTVR CGHCSNLLSV 60 NMRGLLFPPN QLHFGHAFFT SQHLLEDIRS PPSNMLVINQ PNPNDFVMPM RGRTEEIPKP 120 PVVNRPPEKR QRVPSAYNRF IKDEIQRIKA GNPDISHREA FSAAAKNWAH FPHIHLGLMP 180 DQPVKKPNIR QQEADDTIMK DGFFSTTNPA ANVGVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 7e-87 | YABBY family protein |