PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47175.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 451aa    MW: 51550.3 Da    PI: 6.4238
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS322.49.3e-99724501373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn...........sseelaalklfsev 87 
                 +++l+++c e +s++dl  aq+l++ ls ++s++gd+++Rl + +++AL +rl++ ++++  +  ++s  s +n           ++   + + +++++
  PON47175.1  72 MRQLVIRCSELMSQSDLGGAQRLVSVLSANSSSYGDSVERLLHQLARALFRRLHHlMQQHHHHHSSSSIISISNnitdqdydnhdVQALHSCYLTLNQI 170
                 5899*************************************************995443333222222222222233334545533333333455**** PP

        GRAS  88 sPilkfshltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl... 181
                 +P+++f+hltaNqaIle +++   +++Hi+Dfdi++GlQWp+++qaL +R +++ +lRiT+ g     +   l++tg+rL +fA++lg++f+f++l   
  PON47175.1 171 TPFIRFCHLTANQAILEVIDEThqQALHILDFDIMHGLQWPPFMQALVER-HPTLRLRITATGT----DLSLLSRTGDRLLRFAQSLGLRFQFHPLllp 264
                 *******************99877999**********************9.7889*********....9**************************9887 PP

        GRAS 182 .vakrledleleeLrvkp......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                  ++++ + l +++++++       +EalaVn++l lhrll+++ +   +++ +L+ +k l+Pkvv+++e+ea+h        +++ l++y+a+fdslea
  PON47175.1 265 aATHDRDHLLINSININIpstlepDEALAVNCALYLHRLLKDDDDD--CIRYFLRSIKALNPKVVTIAEREANH-------TLADVLDHYTAIFDSLEA 354
                 633455555566664443345555****************666554..5599**********************.......7999************** PP

        GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                 +lp++s+er  vE+++lgrei++vv  e+       +++e W+ +l+++GF++vpls +a +qaklllr ++ s+gy+++  ++s++lgW++rpL+svS
  PON47175.1 355 TLPPNSRERLAVEQVWLGREIMEVVGSEHMV-----RRYEWWQVMLRSCGFSNVPLSPFALSQAKLLLRLHYpSEGYQLHILNDSFFLGWRNRPLFSVS 448
                 **************************99997.....7789*********************************************************** PP

        GRAS 372 aW 373
                 +W
  PON47175.1 449 SW 450
                 ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MLMGSFNSSH HEQRQVGQGD EEEEQEEDQL EQAAAAPSDL EIHRHQQQQV QASHSQAFPA  60
AATSPPINAI HMRQLVIRCS ELMSQSDLGG AQRLVSVLSA NSSSYGDSVE RLLHQLARAL  120
FRRLHHLMQQ HHHHHSSSSI ISISNNITDQ DYDNHDVQAL HSCYLTLNQI TPFIRFCHLT  180
ANQAILEVID ETHQQALHIL DFDIMHGLQW PPFMQALVER HPTLRLRITA TGTDLSLLSR  240
TGDRLLRFAQ SLGLRFQFHP LLLPAATHDR DHLLINSINI NIPSTLEPDE ALAVNCALYL  300
HRLLKDDDDD CIRYFLRSIK ALNPKVVTIA EREANHTLAD VLDHYTAIFD SLEATLPPNS  360
RERLAVEQVW LGREIMEVVG SEHMVRRYEW WQVMLRSCGF SNVPLSPFAL SQAKLLLRLH  420
YPSEGYQLHI LNDSFFLGWR NRPLFSVSSW H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-110GRAS family protein