PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46864.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 401aa MW: 44247 Da PI: 6.3448

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.5e-13	152	203	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ PON46864.1 152 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 203 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MALETVVYNS QDPFSYGYKD FYSSMVGPTT NLGYDFGLQE EEEHKSLVGI FDNHIMDQDI 60 HANFEYYYSS PPSVLQSLAE LGSPNSSSPE ASCPPPPPPP LPLDHQSPPR GSSSSLPGQL 120 TSPVAGPSAT GTGRRKRRRT RSSKNKEELE NQRMTHIAVE RNRRKQMNEY LAVLRSLMPP 180 SYVQRGDQAS IIGGAINFVK ELEQLLQSME GHKVRTKLED HDHDHHHQDD DTKNGGSFSS 240 SSSSSSSSNS SSSSSSSSST TTYSSSSSPL AEFFTFPQYS TRASHYCNNI CENYSKDPIN 300 NSNNQWATAA AADIEVTMVD SHANLKILSK KRPRQLLKMV AGFGVLRLSV LHLNVTSVDQ 360 MVLYSVSVKI EEGCQLNTVD EIASAVNQML HRIQEEPALF S

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MALETVVYNS QDPFSYGYKD FYSSMVGPTT NLGYDFGLQE EEEHKSLVGI FDNHIMDQDI  60
HANFEYYYSS PPSVLQSLAE LGSPNSSSPE ASCPPPPPPP LPLDHQSPPR GSSSSLPGQL  120
TSPVAGPSAT GTGRRKRRRT RSSKNKEELE NQRMTHIAVE RNRRKQMNEY LAVLRSLMPP  180
SYVQRGDQAS IIGGAINFVK ELEQLLQSME GHKVRTKLED HDHDHHHQDD DTKNGGSFSS  240
SSSSSSSSNS SSSSSSSSST TTYSSSSSPL AEFFTFPQYS TRASHYCNNI CENYSKDPIN  300
NSNNQWATAA AADIEVTMVD SHANLKILSK KRPRQLLKMV AGFGVLRLSV LHLNVTSVDQ  360
MVLYSVSVKI EEGCQLNTVD EIASAVNQML HRIQEEPALF S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	139	RKRRR
2	135	140	RKRRRT
3	153	164	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-77	bHLH family protein